signalHsmm: Predict Presence of Signal Peptides

Predicts the presence of signal peptides in eukaryotic protein using hidden semi-Markov models. The implemented algorithm can be accessed from both the command line and GUI.

Version: 1.5
Depends: R (≥ 3.0.0)
Imports: graphics, seqinr, shiny, stats, utils
LinkingTo: Rcpp
Suggests: DT, rmarkdown, shinythemes
Published: 2018-11-15
Author: Michal Burdukiewicz ORCID iD [cre, aut], Piotr Sobczyk [aut], Jaroslaw Chilimoniuk ORCID iD [ctb]
Maintainer: Michal Burdukiewicz <michalburdukiewicz at gmail.com>
License: GPL-3
URL: https://github.com/michbur/signalhsmm
NeedsCompilation: yes
Citation: signalHsmm citation info
Materials: README ChangeLog
CRAN checks: signalHsmm results

Downloads:

Reference manual: signalHsmm.pdf
Package source: signalHsmm_1.5.tar.gz
Windows binaries: r-devel: signalHsmm_1.5.zip, r-devel-gcc8: signalHsmm_1.5.zip, r-release: signalHsmm_1.5.zip, r-oldrel: signalHsmm_1.5.zip
OS X binaries: r-release: signalHsmm_1.5.tgz, r-oldrel: signalHsmm_1.5.tgz
Old sources: signalHsmm archive

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