Last updated on 2023-02-04 00:51:00 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.1.1 | 16.93 | 129.19 | 146.12 | OK | |
| r-devel-linux-x86_64-debian-gcc | 2.1.1 | 13.24 | 93.99 | 107.23 | OK | |
| r-devel-linux-x86_64-fedora-clang | 2.1.1 | 176.31 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 2.1.1 | 188.23 | OK | |||
| r-devel-windows-x86_64 | 2.1.1 | 23.00 | 169.00 | 192.00 | OK | |
| r-patched-linux-x86_64 | 2.1.1 | 16.18 | 119.25 | 135.43 | OK | |
| r-release-linux-x86_64 | 2.1.1 | 17.41 | 116.59 | 134.00 | OK | |
| r-release-macos-arm64 | 2.1.1 | 53.00 | OK | |||
| r-release-macos-x86_64 | 2.1.1 | 67.00 | OK | |||
| r-release-windows-x86_64 | 2.1.1 | 80.00 | 163.00 | 243.00 | OK | |
| r-oldrel-macos-arm64 | 2.1.1 | 45.00 | ERROR | |||
| r-oldrel-macos-x86_64 | 2.1.1 | 67.00 | ERROR | |||
| r-oldrel-windows-ix86+x86_64 | 2.1.1 | 28.00 | 156.00 | 184.00 | ERROR |
Version: 2.1.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [2s/2s]
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-founder-inbreeding.R:24'): setFounderInbreeding works on lists ──
fi(y1) not equal to c(`1` = 1, `2` = 1, `4` = 1).
3/3 mismatches (average diff: 1)
[1] 0 - 1 == -1
[2] 0 - 1 == -1
[3] 0 - 1 == -1
── Failure ('test-founder-inbreeding.R:27'): setFounderInbreeding works on lists ──
fi(y2) not equal to c(`1` = 0, `2` = 1, `4` = 0).
1/3 mismatches
[2] 0 - 1 == -1
[ FAIL 2 | WARN 0 | SKIP 2 | PASS 588 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-arm64
Version: 2.1.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [3s/3s]
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-founder-inbreeding.R:24'): setFounderInbreeding works on lists ──
fi(y1) not equal to c(`1` = 1, `2` = 1, `4` = 1).
3/3 mismatches (average diff: 1)
[1] 0 - 1 == -1
[2] 0 - 1 == -1
[3] 0 - 1 == -1
── Failure ('test-founder-inbreeding.R:27'): setFounderInbreeding works on lists ──
fi(y2) not equal to c(`1` = 0, `2` = 1, `4` = 0).
1/3 mismatches
[2] 0 - 1 == -1
[ FAIL 2 | WARN 0 | SKIP 2 | PASS 588 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64
Version: 2.1.1
Check: tests
Result: ERROR
Running 'testthat.R' [9s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(pedtools)
>
> test_check("pedtools")
[ FAIL 2 | WARN 0 | SKIP 2 | PASS 588 ]
== Skipped tests ===============================================================
* Identity examples - takes long time (1)
* TODO: Mendelian check for X sibships (1)
== Failed tests ================================================================
-- Failure ('test-founder-inbreeding.R:24'): setFounderInbreeding works on lists --
fi(y1) not equal to c(`1` = 1, `2` = 1, `4` = 1).
3/3 mismatches (average diff: 1)
[1] 0 - 1 == -1
[2] 0 - 1 == -1
[3] 0 - 1 == -1
-- Failure ('test-founder-inbreeding.R:27'): setFounderInbreeding works on lists --
fi(y2) not equal to c(`1` = 0, `2` = 1, `4` = 0).
1/3 mismatches
[2] 0 - 1 == -1
[ FAIL 2 | WARN 0 | SKIP 2 | PASS 588 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-windows-ix86+x86_64