CRAN Package Check Results for Package pedtools

Last updated on 2023-02-04 00:51:00 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2.1.1 16.93 129.19 146.12 OK
r-devel-linux-x86_64-debian-gcc 2.1.1 13.24 93.99 107.23 OK
r-devel-linux-x86_64-fedora-clang 2.1.1 176.31 OK
r-devel-linux-x86_64-fedora-gcc 2.1.1 188.23 OK
r-devel-windows-x86_64 2.1.1 23.00 169.00 192.00 OK
r-patched-linux-x86_64 2.1.1 16.18 119.25 135.43 OK
r-release-linux-x86_64 2.1.1 17.41 116.59 134.00 OK
r-release-macos-arm64 2.1.1 53.00 OK
r-release-macos-x86_64 2.1.1 67.00 OK
r-release-windows-x86_64 2.1.1 80.00 163.00 243.00 OK
r-oldrel-macos-arm64 2.1.1 45.00 ERROR
r-oldrel-macos-x86_64 2.1.1 67.00 ERROR
r-oldrel-windows-ix86+x86_64 2.1.1 28.00 156.00 184.00 ERROR

Check Details

Version: 2.1.1
Check: tests
Result: ERROR
     Running ‘testthat.R’ [2s/2s]
    Running the tests in ‘tests/testthat.R’ failed.
    Last 13 lines of output:
     ══ Failed tests ════════════════════════════════════════════════════════════════
     ── Failure ('test-founder-inbreeding.R:24'): setFounderInbreeding works on lists ──
     fi(y1) not equal to c(`1` = 1, `2` = 1, `4` = 1).
     3/3 mismatches (average diff: 1)
     [1] 0 - 1 == -1
     [2] 0 - 1 == -1
     [3] 0 - 1 == -1
     ── Failure ('test-founder-inbreeding.R:27'): setFounderInbreeding works on lists ──
     fi(y2) not equal to c(`1` = 0, `2` = 1, `4` = 0).
     1/3 mismatches
     [2] 0 - 1 == -1
    
     [ FAIL 2 | WARN 0 | SKIP 2 | PASS 588 ]
     Error: Test failures
     Execution halted
Flavor: r-oldrel-macos-arm64

Version: 2.1.1
Check: tests
Result: ERROR
     Running ‘testthat.R’ [3s/3s]
    Running the tests in ‘tests/testthat.R’ failed.
    Last 13 lines of output:
     ══ Failed tests ════════════════════════════════════════════════════════════════
     ── Failure ('test-founder-inbreeding.R:24'): setFounderInbreeding works on lists ──
     fi(y1) not equal to c(`1` = 1, `2` = 1, `4` = 1).
     3/3 mismatches (average diff: 1)
     [1] 0 - 1 == -1
     [2] 0 - 1 == -1
     [3] 0 - 1 == -1
     ── Failure ('test-founder-inbreeding.R:27'): setFounderInbreeding works on lists ──
     fi(y2) not equal to c(`1` = 0, `2` = 1, `4` = 0).
     1/3 mismatches
     [2] 0 - 1 == -1
    
     [ FAIL 2 | WARN 0 | SKIP 2 | PASS 588 ]
     Error: Test failures
     Execution halted
Flavor: r-oldrel-macos-x86_64

Version: 2.1.1
Check: tests
Result: ERROR
     Running 'testthat.R' [9s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library(testthat)
     > library(pedtools)
     >
     > test_check("pedtools")
     [ FAIL 2 | WARN 0 | SKIP 2 | PASS 588 ]
    
     == Skipped tests ===============================================================
     * Identity examples - takes long time (1)
     * TODO: Mendelian check for X sibships (1)
    
     == Failed tests ================================================================
     -- Failure ('test-founder-inbreeding.R:24'): setFounderInbreeding works on lists --
     fi(y1) not equal to c(`1` = 1, `2` = 1, `4` = 1).
     3/3 mismatches (average diff: 1)
     [1] 0 - 1 == -1
     [2] 0 - 1 == -1
     [3] 0 - 1 == -1
     -- Failure ('test-founder-inbreeding.R:27'): setFounderInbreeding works on lists --
     fi(y2) not equal to c(`1` = 0, `2` = 1, `4` = 0).
     1/3 mismatches
     [2] 0 - 1 == -1
    
     [ FAIL 2 | WARN 0 | SKIP 2 | PASS 588 ]
     Error: Test failures
     Execution halted
Flavor: r-oldrel-windows-ix86+x86_64